PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678429606
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family DBB
Protein Properties Length: 234aa    MW: 25619.8 Da    PI: 5.1339
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678429606genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box22.72e-07444539
   zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39
                C+ +e+ +++  C  ++  lC  C +e H        H++
  678429606  4 QCDVCEKAPATVICCADEAALCGACDVEVHAAnmlaskHQR 44
               7*****************************65677777765 PP

2zf-B_box29.61.4e-095494337
   zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg......H 37
                ++C+ ++ek + +fC +++ l+CedC + +H+       H
  678429606 54 LPRCDICQEKSAFIFCVEDRALFCEDCDEPIHSAnkraagH 94
               589*****************************555566666 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501199.03147IPR000315B-box-type zinc finger
CDDcd000211.00E-6347No hitNo description
SMARTSM003361.4E-8447IPR000315B-box-type zinc finger
PfamPF006439.7E-6444IPR000315B-box-type zinc finger
SMARTSM003361.3E-145299IPR000315B-box-type zinc finger
CDDcd000212.35E-75598No hitNo description
PfamPF006434.6E-85595IPR000315B-box-type zinc finger
PROSITE profilePS501198.565799IPR000315B-box-type zinc finger
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MKIQCDVCEK APATVICCAD EAALCGACDV EVHAANMLAS KHQRLLLQSL SNVLPRCDIC  60
QEKSAFIFCV EDRALFCEDC DEPIHSANKR AAGHQRFLAT GIRVASSSGG GCDDTGKHYQ  120
QPDPPKASLQ QVPSFAPASW AVDDLPQLPE HGSTGKGGLE LNELEWLKDI DFFGEQVSQK  180
SGAAAEVPEL RAYQPQSTNC NKQAKYHHHH PVHKKPRIEI LDDEEDMFTV PDLG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011091647.11e-98PREDICTED: B-box zinc finger protein 24
SwissprotQ962885e-82BBX24_ARATH; B-box zinc finger protein 24
TrEMBLA0A0L9UP242e-94A0A0L9UP24_PHAAN; Uncharacterized protein
TrEMBLA0A0S3SG872e-94A0A0S3SG87_PHAAN; Uncharacterized protein
STRINGVIT_05s0102g00750.t011e-93(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA54102233
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06040.15e-80DBB family protein